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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866519.1_cds_XP_016432725.1_28941
CDS Infomation

[gene=LOC107759340] [db_xref=GeneID:107759340] [protein=glutamate receptor 3.4-like isoform X2] [protein_id=XP_016432725.1] [location=complement(join(12622..13080,13268..13677,13775..13806,14018..14295,21293..22618))] [gbkey=CDS]
Sequence

ATGGAGAAAGAAGTGGTTGCTGCAGTGGGTCCGCAGTCCTCAGGAATAGCACATGTCATT
TCTCATGTCGTGAATGAACTTCGTGTCCCGCTTTTGTCTTTTGCGACTGATCCTACTCTT
TCCTCTCTGCAGTACCCATATTTCCTTAGAACTGTCACAAATGATTACTTCCAGATGTAT
GCTATTGCTGATTTGGTCGATTATTATGGATGGAAGGAGGTTATAGCCATATTTGTCGAT
GATGATAATGGTAGAAATGGGATATCTGTGTTGGGTGATGCCCTTGCAAAGAAGCGGGCC
AAGATCTCTTATAAAGCAGCCTTAACTCCTGGAGCTAGTAGGAGTGAGATCGATGACTTG
TTAGCCAGCGTAAACCTTATGGAGGCACGAGTTTATATTATTCATGTAAATCCTGATACT
GGACTATCATTTTTCTCCAAGGCAAAGAATCTGGGTATGATGAGCAGTGGCTATGTCTGG
ATTGCCACTGATTGGCTTCCATCTGTTTTGGATTCATCAGATTCAGTTAATGCAGATACT
ATGGACCTAATACAGGGGGTTGTGGCGCTTCGCCATCACACTCCGGATTCTAATCAGAAA
AAGACATTTGCATCTCGATGGAAAAATTTTAAGGGTGTAAAGACTTCAAATTTTAATTCT
TATGCACTCTATGCTTATGATACAGTTTGGTTGGTTGCCCGTGCTCTTGACCTTTTCTTC
AATGATGGTGGAAATGTCACCTTTTCTGATGATCCCAGTTTGCGTGACACTAATGGAAGT
GCTCTGAACTTGTCATCCCTCCGAGTTTTCGACCAAGGGCAGAAGTTACTTGAGATACTT
ACTGGCCTGAACATCACTGGTCTAACTGGTCGGATTCAGTTTGATTCTCAGAAAAATTTG
ATTCATTCAGCGTATGATGTTCTTAACATAGGTGGAACTGGATTACGCACGATAGGTTAC
TGGTCAAACTATTCTGGTCTCTCTGTTATAACTCCAGAGGTTTTATACACAATGCCTGCA
AATACTTCAACAAGTAACCAACATCTATATAATGCTATATGGCCAGGAGAAACTATAAAA
CGACCTCGAGGATGGGTGTTCCCCAATAATGGCAAACCCCTGCGAATTGCCGTTCCTTTC
CGTGTTACTTTTGAAGAGTTTGTGAATAAAGACAAAGGACCTTCTGGAGTGAAAGGATAT
TGCATTGATGTGTTTGAGGCTGCAATAGACTTGTTGGCTTACCCTGTCCCTCATGTCTAC
ATTTTATATGGAGATGGAAAAAGAAACCCCTCATTCAACAACATAGTGTATGATGTTGCA
CAAAATAAATATGATGCAGCTGTTGGGGATATTTCAATTACGACAAATCGGACAAGGATT
GTGGACTTCACACAGCCTTACATGGAATCTGGGCTTGTCGTGGTTACTCCTGTCAAAGAG
ATCAAATCCAGTCCATGGGCTTTCCTTAGGCCATTTACATTTCAAATGTGGTGTGTAACT
GGGGCATTCTTCCTCTTTGTTGGCTTTGTTGTTTGGATTCTTGAGCACCGGTTGAATCCT
GAATTCCGTGGTCCACCAAGGCAACAACTCGTTACAGTCTTCTGGTTTAGTTTCTCAACC
ATGTTTTTCGCACACAGAGAGAACACATTGAGCACCTTGGGACGCTTTGTGTTACTCTTT
TGGCTCTTTGTGGTTTTAATTATCAATTCAAGTTATACAGCTAGCTTGACATCTATCCTT
ACAGTACAGAAGCTCTCTTCGGGAATAGAAGGAATTGACAGTTTAATCTCAAGCTCCGAT
CCTATAGGAGTCCAGGATGGGTCATTTGCATACAATTATCTCATTGAGGAGCTACGTGTT
TCAACGTCACGGCTCCGAATAATAAAAAGCGAGGATGAATATGTCAGTTTCCTACAGAAA
GGTCCACAAGGTGGTGGTGTTACTGCCATTGTTGACGAGCTCCCTTATGTTGAGCTGTTT
TTGTCCAATAACAAATGCATATTCAGGACTGTGGGGCAGGAGTTCACAAAGAGCGGATGG
GGCTTCGCATTTCAAAGGGATTCTCCTCTGGCTGTTGATTTGTCTACTGCGATCCTTCAA
CTGTCAGAAAATGGTGAACTACAAAGGATCCATGACAAATGGCTATCTAACAATGGATGC
TCTTCACAAAACAACCAAGTCGATGACACTCGGCTTTCTCTCAAGAGCTTCTGGGGCCTG
TATGTGATCTGTGGTGCTGCTTGTGCCATCGCACTTATAGTGTTTTTCTGCAGGGTTTAC
TGTCAATTCCTCAGGTACGCCCCCGAGACAGAGGAGCAGGAGATTAGTGAACCTGAATCT
GCAAGGTCAAGTAGGCGTTCCCTCCGCTCACGTAGCTTCAAGGACTTGATTGAAGTTTTT
GATAAAAGAGAAACCGAGCTTAAAGAAATACTCAAGCGTAAGAACAGTGACAACAAGAAA
CAGATAAGTCACAGCTCAGATGTGCAACCGATCTCGCCTGCTTGA

Peptide Sequence

PEP ID

XP_016432725.1
PEP Infomation

PREDICTED: glutamate receptor 3.4-like isoform X2 [Nicotiana tabacum]
Sequence

MEKEVVAAVGPQSSGIAHVISHVVNELRVPLLSFATDPTLSSLQYPYFLRTVTNDYFQMY
AIADLVDYYGWKEVIAIFVDDDNGRNGISVLGDALAKKRAKISYKAALTPGASRSEIDDL
LASVNLMEARVYIIHVNPDTGLSFFSKAKNLGMMSSGYVWIATDWLPSVLDSSDSVNADT
MDLIQGVVALRHHTPDSNQKKTFASRWKNFKGVKTSNFNSYALYAYDTVWLVARALDLFF
NDGGNVTFSDDPSLRDTNGSALNLSSLRVFDQGQKLLEILTGLNITGLTGRIQFDSQKNL
IHSAYDVLNIGGTGLRTIGYWSNYSGLSVITPEVLYTMPANTSTSNQHLYNAIWPGETIK
RPRGWVFPNNGKPLRIAVPFRVTFEEFVNKDKGPSGVKGYCIDVFEAAIDLLAYPVPHVY
ILYGDGKRNPSFNNIVYDVAQNKYDAAVGDISITTNRTRIVDFTQPYMESGLVVVTPVKE
IKSSPWAFLRPFTFQMWCVTGAFFLFVGFVVWILEHRLNPEFRGPPRQQLVTVFWFSFST
MFFAHRENTLSTLGRFVLLFWLFVVLIINSSYTASLTSILTVQKLSSGIEGIDSLISSSD
PIGVQDGSFAYNYLIEELRVSTSRLRIIKSEDEYVSFLQKGPQGGGVTAIVDELPYVELF
LSNNKCIFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGELQRIHDKWLSNNGC
SSQNNQVDDTRLSLKSFWGLYVICGAACAIALIVFFCRVYCQFLRYAPETEEQEISEPES
ARSSRRSLRSRSFKDLIEVFDKRETELKEILKRKNSDNKKQISHSSDVQPISPA

Transcript Sequence

Gene sequence data has not been registered.